Browse of TCMCG007C56467 protein

CDS

Accession Number	TCMCG007C56467
gbkey	CDS
Protein Id	XP_009145383.1
Location	complement(join(31919399..31919610,31919711..31919812,31919927..31920332,31920735..31921766))
Gene	LOC103869084
GeneID	103869084
Organism	Brassica rapa

Protein

Length	583aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009147135.3
Definition	serine hydroxymethyltransferase 6 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	E
Description	Interconversion of serine and glycine
KEGG_TC	-
KEGG_Module	M00140        [VIEW IN KEGG] M00141        [VIEW IN KEGG] M00346        [VIEW IN KEGG] M00532        [VIEW IN KEGG]
KEGG_Reaction	R00945        [VIEW IN KEGG] R09099        [VIEW IN KEGG]
KEGG_rclass	RC00022        [VIEW IN KEGG] RC00112        [VIEW IN KEGG] RC01583        [VIEW IN KEGG] RC02958        [VIEW IN KEGG]
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG]
KEGG_ko	ko:K00600        [VIEW IN KEGG]
EC	2.1.2.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00260        [VIEW IN KEGG] ko00460        [VIEW IN KEGG] ko00630        [VIEW IN KEGG] ko00670        [VIEW IN KEGG] ko00680        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko01110        [VIEW IN KEGG] ko01120        [VIEW IN KEGG] ko01130        [VIEW IN KEGG] ko01200        [VIEW IN KEGG] ko01230        [VIEW IN KEGG] ko01523        [VIEW IN KEGG] map00260        [VIEW IN KEGG] map00460        [VIEW IN KEGG] map00630        [VIEW IN KEGG] map00670        [VIEW IN KEGG] map00680        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map01110        [VIEW IN KEGG] map01120        [VIEW IN KEGG] map01130        [VIEW IN KEGG] map01200        [VIEW IN KEGG] map01230        [VIEW IN KEGG] map01523        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004372        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005739        [VIEW IN EMBL-EBI] GO:0005759        [VIEW IN EMBL-EBI] GO:0006730        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016740        [VIEW IN EMBL-EBI] GO:0016741        [VIEW IN EMBL-EBI] GO:0016742        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044281        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044429        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGACCGTGCTGCTCAATCGGATCTCTCCTTGGGATTCACCAGCCCCCACGCCTTGCCGCGAATCCCTATCGCCGATGACTCCATCACCCTTCAAATCGACTCCAGCTTCCGCCCTCCTTCCTCTAACCCGATGCCCCCTGTCCCCCTCCAGCTCCTCGAGCAGAGATTCGATGCCACCGGAGGATCGCATCGCCTCCATAAAGACCAAGACTTTGATGATGATGATGATGATCAGAGGGAAGAGTTCATCCTCTTGGGACAACCGTTGAAGCTAAAACGCTCTAGAGGCAGCACCAGCTCAATGCGATCGCCAAGCCCTTGTAAGCGATTCGCAGCCGATCCAGAAACTAGACGAGCCGCCGTCAAAGCGTGGGGCGACCAGTCACTCTCGGAAGCAGACCCCGAGATTCACGACTTCATGGAGAAGGAGAAGCAGAGACAGTTCCGAGGAATCGAGCTCATTGCCTCCGAGAATTTCGTCTGTAGAGCAGTGATGGAAGCTTTGGGAAGCCATCTCACTAACAAGTACTCCGAAGGCATCCCTGGAGCTAGATACTACACAGGCAACCAGTACATCGATCAGATCGAGATCCTTTGCCAAGAACGTGCCCTGCAAGCTTTCGGTCTACATCCTGAGCATTGGGGTGTTAACGTGCAACCGTACTCTTGCACGTCCGCCAACTTCGCTGTCTTCTCAGGTCTTTTGTTGCCAGGGGAGCGGATCATGGGGTTGGATTCGCCTTCGGGTGGTCATATGAGTCATGGGTACTACACGCCTGGTGGGAAGAAAGTCTCTGGTGCGTCTATATTCTTTGAGAGCTTTCCCTATAAGGTGGATCCTCGTACAGGGTACATTGATTACGACAAGCTTGAGGAGAAGGCGCTTGACTATCGTCCTAAGATACTTATCTGTGGAGGGAGTTCGTATCCTAGAGACTGGGACTTTCCTAGGTTTAGGTATGTTGCTGACAAATGTGGAGCTGTTCTCATGTTTGACATGGCACAGATTAGCGGTCTTGTTGCTGCCAAGGAAAGTCCAAATCCATTTGATTATTGCGATATAGTTACCTCAACGACACACAAGTCTCTCCGGGGACCTAGGGGCGGTATCATATTCTACAGGAGAGGCTTGAAGGGCAAGAAGCAAAGCATAAATCTTAATCACTGTGAGACCAATATCCAATATGATTTTGAGGAGAAAATAAACTTTTCTGTCTTCCCATCGCTGCAAGGAGGTCCTCACAATAACCATATAGCTGCTCTAGCCATTGCCCTCAAGCAGGCTGCTTCACCTGAGTACAAGGCTTACATGCGACAGGTCAAGAAAAATGCCAAGGCTTTAGCATCTGCTTTGATAAGCAAAAATTGCAAGTTGGTCACAAATGGCACTGATAATCATTTGATGCTCTGGGATCTAACTCCTTTGGGCTTGACAGGCAAAGTGTATGAGAAAGTATGCGAGATGTGCCATATCACGGTCAACAAAGTCGCCATTTTCAGTGAAAACGGTGTTATTTCCCCTGGAGGAGTGAGAATAGGTAGTCCGGCTATGACTTCGAGAGGTTGTCTAGAATCAGATTTTGAGACAATGGCTGAGTTTCTGTATAGAGCTGCTCTGATAGCAAGTGCTGCACAGAGGGAGCAGGGGAAGTCACTCAAAAGCATCTATCACTGTAAGGACATTGCAGATCTTAGGAACCAAGTCGAGGCTTTTGCTTCTCAGTTTGCAATGCCTGCGTTTGACATGTGA

Protein:   MDRAAQSDLSLGFTSPHALPRIPIADDSITLQIDSSFRPPSSNPMPPVPLQLLEQRFDATGGSHRLHKDQDFDDDDDDQREEFILLGQPLKLKRSRGSTSSMRSPSPCKRFAADPETRRAAVKAWGDQSLSEADPEIHDFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGIPGARYYTGNQYIDQIEILCQERALQAFGLHPEHWGVNVQPYSCTSANFAVFSGLLLPGERIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPKILICGGSSYPRDWDFPRFRYVADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTHKSLRGPRGGIIFYRRGLKGKKQSINLNHCETNIQYDFEEKINFSVFPSLQGGPHNNHIAALAIALKQAASPEYKAYMRQVKKNAKALASALISKNCKLVTNGTDNHLMLWDLTPLGLTGKVYEKVCEMCHITVNKVAIFSENGVISPGGVRIGSPAMTSRGCLESDFETMAEFLYRAALIASAAQREQGKSLKSIYHCKDIADLRNQVEAFASQFAMPAFDM